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Dissemination

Dissemination

Communication:Covers the whole project (including results).Starts at the beginning of the project.Multiple audiences: beyond the project's own community, including the media and general public.Informing and engaging with society to show how it can benefit from research.
Dissemination:Covers project results only.Happens only when results are available.Specialist audiences: groups that may use the results in their own work, including peer groups, industry, professional organisations, and policymakers.Enabling the assimilation and use of results.

Publications

DC12 Flore N’kam Suguem:

Flore N'kam Suguem, Sébastien Déjean, Philippe Saint Pierre, Nicolas Savy.
"Comparing optimal transport and machine learning approaches for databases merging in scenarios involving missing data in covariates. Application to medical research."
Bioinformatics, 2026, 42(8), btag594. https://doi.org/10.1093/bioinformatics/btag594.

DC12 Flore N’kam Suguem:

Flore N'kam Suguem, Valentin Lafargue.
"OpenHSR: An open, FAIR-compliant dataset for modeling the health star rating system."
Open Res Europe 2025, 5:374 https://doi.org/10.12688/openreseurope.21837.1.

Conference Papers

DC9 Xingyu Zhu:

Xingyu Zhu; Claire Nédellec; Balazs Nagy; Laszlo Vidacs; Robert Bossy.
"SCoNE: a Self-Correcting and Noise-Augmented Method for Complex Biological and Chemical Named Entity Recognition."
The 19th Conference of the European Chapter of the Association for Computational Linguistics.
hal-05537059v1

DC7 Hashmat Bakshi:

Hashmat Bakshi, Irene Otero-Muras
Automated Detection of Metabolic Switches and Key Regulators: Application to Lactococcus lactis Fermentation 
FOODSIM 2026 - 14th biennial FOODSIM’2026, EUROSIS, Apr 2026, Ghent, Belgium. https://eurosis.org/conf/foodsim/2026/index.html

DC8 Francisca Pizarro:

Francisca Pizarro, Satyajeet Bhonsale and Jan F.M. Van Impe
PIDE-Based Uncertainty Quantification in Stochastic Gene Regulatory Networks 
FOODSIM 2026 - 14th biennial FOODSIM’2026, EUROSIS, Apr 2026, Ghent, Belgium. https://eurosis.org/conf/foodsim/2026/index.html

DC10 Pedro Duarte:

Pedro Duarte, Francesco Durazzi and Daniel Remondini
Ecologically Mediated Relationships among Food Phenotypes 
FOODSIM 2026 - 14th biennial FOODSIM’2026, EUROSIS, Apr 2026, Ghent, Belgium. https://eurosis.org/conf/foodsim/2026/index.html

DC3 Marvina Oikonomou:

Maria-Vagia Oikonomou, Eleni Kollia, Foteini Roumani, Efstathios Z. Panagou, Marilena Dasenaki and Vasilis Valdramidis
Natural Fermentation of Black Conservolae and Kalamata Olives: Microbiological and Physicochemical Responses 
FOODSIM 2026 - 14th biennial FOODSIM’2026, EUROSIS, Apr 2026, Ghent, Belgium. https://eurosis.org/conf/foodsim/2026/index.html

DC9 Xingyu Zhu:

Xingyu Zhu
Extracting Food-Fermentation Knowledge using an NER Framework from Biological and Chemical Domains with LLM-Assisted Silver Annotations
FOODSIM 2026 - 14th biennial FOODSIM’2026, EUROSIS, Apr 2026, Ghent, Belgium. https://eurosis.org/conf/foodsim/2026/index.html 
hal-05537047v1

DC1 Isa Hollopp:

Isa Hollopp, Eric Dugat-Bony, Pascal Bonnarme, Lukas Y. Wick and Vincent Hervé
Searching for Synergistic Bacterial Partners to improve Lentil Flour Fermentation by Pleurotus Ostreatus 
FOODSIM 2026 - 14th biennial FOODSIM’2026, EUROSIS, Apr 2026, Ghent, Belgium. https://eurosis.org/conf/foodsim/2026/index.html 
hal-05549963v1

DC6 Saeed Salehi:

Saeed Salehi, Satyajeet Sheetal Bhonsale, Jan F.M. Van Impe and Eva Balsa-Canto
A Systematic Assessment of Generalized Lotka-Volterra Model Reliability for Microbial Interaction Inference 
FOODSIM 2026 - 14th biennial FOODSIM’2026, EUROSIS, Apr 2026, Ghent, Belgium. https://eurosis.org/conf/foodsim/2026/index.html

DC11 Zoé Le Roux:

Zoe Leroux, Alessandra Merlotti, Francesco Durazzi, Daniel Remondini, Sandra Dérozier, Hélène Chiapello
Community Detection in a Plant-based Fermentation Knowledge Graph 
FOODSIM 2026 - 14th biennial FOODSIM’2026, EUROSIS, Apr 2026, Ghent, Belgium. https://eurosis.org/conf/foodsim/2026/index.html 
hal-05540516v1

DC12 Flore N’kam Suguem:

Flore N’kam Suguem
Optimal Transport for Database Integration: A Nutritional Case Study
FOODSIM 2026 - 14th biennial FOODSIM’2026, EUROSIS, Apr 2026, Ghent, Belgium. https://eurosis.org/conf/foodsim/2026/index.html

DC13 Amgad Abdulmaqsod:

Amgad Abdulmaqsod, Reda Ihtassine, Caroline Pénicaud, Anne Saint-Eve, Lucia Brisset, Axel-Cyrille Ngonga Ngomo and Mohamed Ahmed Sherif
PBFF-KG: A FAIR Knowledge Graph towards Sustainable Design of Plant-Based Fermented Foods
FOODSIM 2026 - 14th biennial FOODSIM’2026, EUROSIS, Apr 2026, Ghent, Belgium. https://eurosis.org/conf/foodsim/2026/index.html

Datasets

DC12 Flore N’kam Suguem:

Open Health Star Rating (OpenHSR).
https://zenodo.org/records/17469191

DC9 Xingyu Zhu:

Silver Corpus for Plant-based Food Fermentation Information Extraction.
https://entrepot.recherche.data.gouv.fr/dataset.xhtml?persistentId=doi:10.57745/MI7Q9W

Workflows

DC12 Flore N’kam Suguem:

Computational notebook linked to OpenHSR article (https://doi.org/10.12688/openreseurope.21837.1)
https://zenodo.org/records/17556223